Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Cdc40Q9DC48 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdc40Q9DC48 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdc40Q9DC48 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdc40Q9DC48 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.47□□□□□ -0.09
Cdc40Q9DC48 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdc40Q9DC48 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdc40Q9DC48 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdc40Q9DC48 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdc40Q9DC48 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdc40Q9DC48 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdc40Q9DC48 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdc40Q9DC48 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cdc40Q9DC48 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdc40Q9DC48 Gm10060-201ENSMUST00000212002 111 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms