Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Gm6257-201ENSMUST00000163864 910 ntBASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Gm37935-201ENSMUST00000192012 982 ntBASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Gm5867-201ENSMUST00000063197 592 ntBASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rsph9Q9D9V4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rsph9Q9D9V4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Gm15467-201ENSMUST00000120582 445 ntBASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Gm5264-201ENSMUST00000190584 848 ntBASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rsph9Q9D9V4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.27■□□□□ 0.04
Rsph9Q9D9V4 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms