Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp5Q9D7S9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.52■□□□□ 0.71
Chmp5Q9D7S9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp5Q9D7S9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp5Q9D7S9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp5Q9D7S9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chmp5Q9D7S9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Gm10676-201ENSMUST00000098778 3221 ntBASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp5Q9D7S9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Mir770-201ENSMUST00000103252 94 ntBASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Chmp5Q9D7S9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms