Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Upk3bl1Q9D701 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk3bl1Q9D701 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Gm28196-201ENSMUST00000187719 640 ntBASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk3bl1Q9D701 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk3bl1Q9D701 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bl1Q9D701 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bl1Q9D701 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.21□□□□□ -0.14
Upk3bl1Q9D701 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Upk3bl1Q9D701 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bl1Q9D701 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bl1Q9D701 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bl1Q9D701 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk3bl1Q9D701 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms