Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tube1Q9D6T1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.32■□□□□ 0.36
Tube1Q9D6T1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tube1Q9D6T1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Gm8655-201ENSMUST00000221159 852 ntBASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tube1Q9D6T1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Gm11780-201ENSMUST00000136880 516 ntBASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Tube1Q9D6T1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tube1Q9D6T1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tube1Q9D6T1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.29■□□□□ 0.36
Tube1Q9D6T1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tube1Q9D6T1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tube1Q9D6T1 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms