Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Gm23547-201ENSMUST00000158210 271 ntBASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Gm18666-201ENSMUST00000190039 958 ntBASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps33aQ9D2N9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps33aQ9D2N9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps33aQ9D2N9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms