Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.44■□□□□ 0.38
Smc1aQ9CU62 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Gm2651-201ENSMUST00000203560 838 ntBASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smc1aQ9CU62 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smc1aQ9CU62 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Gm6376-201ENSMUST00000209407 580 ntBASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.41■□□□□ 0.38
Smc1aQ9CU62 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Gm15165-201ENSMUST00000118140 502 ntBASIC17.4■□□□□ 0.38
Smc1aQ9CU62 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smc1aQ9CU62 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms