Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldnd1Q9CQX5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.92■□□□□ 0.14
Cldnd1Q9CQX5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldnd1Q9CQX5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldnd1Q9CQX5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldnd1Q9CQX5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldnd1Q9CQX5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cldnd1Q9CQX5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.92■□□□□ 0.14
Cldnd1Q9CQX5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Gm6415-201ENSMUST00000118488 348 ntBASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cldnd1Q9CQX5 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Gm6973-201ENSMUST00000117080 721 ntBASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Gm14127-201ENSMUST00000117906 678 ntBASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Gm15693-201ENSMUST00000120470 637 ntBASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Gm27306-201ENSMUST00000183970 107 ntBASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Gm38294-201ENSMUST00000192831 381 ntBASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cldnd1Q9CQX5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
Cldnd1Q9CQX5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Gm8318-201ENSMUST00000182954 872 ntBASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Haglr-201ENSMUST00000100000 2085 ntBASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.89■□□□□ 0.13
Cldnd1Q9CQX5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cldnd1Q9CQX5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms