Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retreg3Q9CQV4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Gm13418-201ENSMUST00000119097 944 ntBASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Gm43275-201ENSMUST00000202053 1020 ntBASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Gm2651-201ENSMUST00000203560 838 ntBASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 AC114573.1-201ENSMUST00000224120 1210 ntBASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retreg3Q9CQV4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Gm14913-201ENSMUST00000120011 1093 ntBASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retreg3Q9CQV4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms