Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chchd1Q9CQA6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Chchd1Q9CQA6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chchd1Q9CQA6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chchd1Q9CQA6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chchd1Q9CQA6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chchd1Q9CQA6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chchd1Q9CQA6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chchd1Q9CQA6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chchd1Q9CQA6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Gm17661-201ENSMUST00000170317 270 ntBASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chchd1Q9CQA6 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms