Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Gm15165-201ENSMUST00000118140 502 ntBASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim11Q99PQ2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Gm7367-201ENSMUST00000057611 492 ntBASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim11Q99PQ2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim11Q99PQ2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim11Q99PQ2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim11Q99PQ2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim11Q99PQ2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trim11Q99PQ2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.77■□□□□ 0.43
Trim11Q99PQ2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim11Q99PQ2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim11Q99PQ2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Sybu-209ENSMUST00000228639 4113 ntBASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.76■□□□□ 0.43
Trim11Q99PQ2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Gm27357-201ENSMUST00000183754 135 ntBASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim11Q99PQ2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim11Q99PQ2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms