Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.33■□□□□ 0.05
Trim8Q99PJ2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim8Q99PJ2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim8Q99PJ2 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Gm45058-201ENSMUST00000205810 766 ntBASIC15.33■□□□□ 0.04
Trim8Q99PJ2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Gm18959-201ENSMUST00000208954 655 ntBASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim8Q99PJ2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim8Q99PJ2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim8Q99PJ2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim8Q99PJ2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms