Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 AY702102-202ENSMUST00000194651 1173 ntBASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col25a1Q99MQ5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col25a1Q99MQ5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Gm45331-201ENSMUST00000209868 554 ntBASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col25a1Q99MQ5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col25a1Q99MQ5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col25a1Q99MQ5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col25a1Q99MQ5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col25a1Q99MQ5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Col25a1Q99MQ5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col25a1Q99MQ5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms