Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf111Q99ML9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Gm33142-201ENSMUST00000193913 867 ntBASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Gm10819-201ENSMUST00000099988 561 ntBASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf111Q99ML9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf111Q99ML9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf111Q99ML9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms