Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkd1Q99MH6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkd1Q99MH6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkd1Q99MH6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkd1Q99MH6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkd1Q99MH6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Gm6623-201ENSMUST00000173570 544 ntBASIC14.74□□□□□ -0.05
Nkd1Q99MH6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkd1Q99MH6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.73□□□□□ -0.05
Nkd1Q99MH6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkd1Q99MH6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkd1Q99MH6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Gm9013-201ENSMUST00000132939 882 ntBASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nkd1Q99MH6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Nkd1Q99MH6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms