Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap3Q99LM2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap3Q99LM2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap3Q99LM2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap3Q99LM2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap3Q99LM2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cdk5rap3Q99LM2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdk5rap3Q99LM2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Gm11950-201ENSMUST00000121615 838 ntBASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Gm10231-201ENSMUST00000181584 441 ntBASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Gm10175-202ENSMUST00000208752 441 ntBASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdk5rap3Q99LM2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdk5rap3Q99LM2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdk5rap3Q99LM2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.15■□□□□ 0.18
Cdk5rap3Q99LM2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms