Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Mir6990-201ENSMUST00000183724 91 ntBASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Gm43474-201ENSMUST00000196415 774 ntBASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.55■□□□□ 0.08
Cstf1Q99LC2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Gm18489-201ENSMUST00000172565 551 ntBASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Gm5177-201ENSMUST00000183092 997 ntBASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cstf1Q99LC2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Gm22175-201ENSMUST00000175007 78 ntBASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cstf1Q99LC2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms