Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.98■□□□□ 0.47
Smc1bQ920F6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.98■□□□□ 0.47
Smc1bQ920F6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smc1bQ920F6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.97■□□□□ 0.47
Smc1bQ920F6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.97■□□□□ 0.47
Smc1bQ920F6 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.97■□□□□ 0.47
Smc1bQ920F6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Smc1bQ920F6 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.97■□□□□ 0.47
Smc1bQ920F6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smc1bQ920F6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smc1bQ920F6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smc1bQ920F6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Smc1bQ920F6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.95■□□□□ 0.46
Smc1bQ920F6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Gm11025-201ENSMUST00000140773 466 ntBASIC17.95■□□□□ 0.46
Smc1bQ920F6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.95■□□□□ 0.46
Smc1bQ920F6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.95■□□□□ 0.46
Smc1bQ920F6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.95■□□□□ 0.46
Smc1bQ920F6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.95■□□□□ 0.46
Smc1bQ920F6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.94■□□□□ 0.46
Smc1bQ920F6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.94■□□□□ 0.46
Smc1bQ920F6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.94■□□□□ 0.46
Smc1bQ920F6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smc1bQ920F6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms