Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha9Q91Y11 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Gm7222-201ENSMUST00000117512 906 ntBASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha9Q91Y11 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Gm18195-201ENSMUST00000207604 706 ntBASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Gm10060-201ENSMUST00000212002 111 ntBASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdha9Q91Y11 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha9Q91Y11 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms