Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 AA414768-201ENSMUST00000121924 1257 ntBASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb3Q91XZ7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdhb3Q91XZ7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Gm21362-201ENSMUST00000194272 928 ntBASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb3Q91XZ7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms