Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb5Q91XZ5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb5Q91XZ5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb5Q91XZ5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb5Q91XZ5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb5Q91XZ5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb5Q91XZ5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Gm14722-201ENSMUST00000118943 689 ntBASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb5Q91XZ5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Gm13365-201ENSMUST00000121188 973 ntBASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb5Q91XZ5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Gm12008-201ENSMUST00000117791 755 ntBASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb5Q91XZ5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb5Q91XZ5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdhb5Q91XZ5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms