Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhgc5Q91XW9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgc5Q91XW9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Gm5682-201ENSMUST00000173402 505 ntBASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Gm27646-201ENSMUST00000183989 110 ntBASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhgc5Q91XW9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhgc5Q91XW9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhgc5Q91XW9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms