Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim60Q8VI40 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim60Q8VI40 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim60Q8VI40 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim60Q8VI40 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.14■□□□□ 0.17
Trim60Q8VI40 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Trim60Q8VI40 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim60Q8VI40 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.13■□□□□ 0.17
Trim60Q8VI40 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim60Q8VI40 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Gm11950-201ENSMUST00000121615 838 ntBASIC16.12■□□□□ 0.17
Trim60Q8VI40 Gm25406-201ENSMUST00000157599 105 ntBASIC16.12■□□□□ 0.17
Trim60Q8VI40 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.12■□□□□ 0.17
Trim60Q8VI40 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trim60Q8VI40 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms