Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lmcd1Q8VEE1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lmcd1Q8VEE1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lmcd1Q8VEE1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Gm6912-201ENSMUST00000117218 544 ntBASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Gm6257-201ENSMUST00000163864 910 ntBASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Gm9824-201ENSMUST00000178707 561 ntBASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Gm6888-201ENSMUST00000221983 706 ntBASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lmcd1Q8VEE1 Syt7-205ENSMUST00000224135 1557 ntBASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lmcd1Q8VEE1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Gm6973-201ENSMUST00000117080 721 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Gm14719-201ENSMUST00000121891 340 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Gm38294-201ENSMUST00000192831 381 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Gm10154-201ENSMUST00000084445 354 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lmcd1Q8VEE1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lmcd1Q8VEE1 Gm2810-201ENSMUST00000118681 990 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms