Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Gm6296-201ENSMUST00000222599 943 ntBASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.22□□□□□ -0.13
Nkd2Q8VE28 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkd2Q8VE28 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Nkd2Q8VE28 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkd2Q8VE28 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms