Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gtf2a1lQ8R4I4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gtf2a1lQ8R4I4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gtf2a1lQ8R4I4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gtf2a1lQ8R4I4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gtf2a1lQ8R4I4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gtf2a1lQ8R4I4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms