Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cdt1Q8R4E9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdt1Q8R4E9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdt1Q8R4E9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdt1Q8R4E9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdt1Q8R4E9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdt1Q8R4E9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.08■□□□□ 0.01
Cdt1Q8R4E9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Gm23935-201ENSMUST00000102303 57 ntBASIC15.08■□□□□ 0
Cdt1Q8R4E9 Gm24270-201ENSMUST00000102326 57 ntBASIC15.08■□□□□ 0
Cdt1Q8R4E9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Gm24245-201ENSMUST00000157318 57 ntBASIC15.08■□□□□ 0
Cdt1Q8R4E9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.08■□□□□ 0
Cdt1Q8R4E9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdt1Q8R4E9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms