Protein–RNA interactions for Protein: Q8R2G6

Ccdc80, Coiled-coil domain-containing protein 80, mousemouse

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc80Q8R2G6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc80Q8R2G6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc80Q8R2G6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc80Q8R2G6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc80Q8R2G6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ccdc80Q8R2G6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc80Q8R2G6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc80Q8R2G6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc80Q8R2G6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Gm7791-201ENSMUST00000219066 539 ntBASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc80Q8R2G6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc80Q8R2G6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Timm23-208ENSMUST00000226683 750 ntBASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ccdc80Q8R2G6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ccdc80Q8R2G6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc80Q8R2G6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc80Q8R2G6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc80Q8R2G6 Mir1199-201ENSMUST00000117015 119 ntBASIC15.27■□□□□ 0.04
Ccdc80Q8R2G6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc80Q8R2G6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc80Q8R2G6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms