Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.19■□□□□ 0.02
Alms1Q8K4E0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Gm43474-201ENSMUST00000196415 774 ntBASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alms1Q8K4E0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Mir1895-201ENSMUST00000122615 79 ntBASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Gm25948-201ENSMUST00000175334 112 ntBASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.18■□□□□ 0.02
Alms1Q8K4E0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Mir449b-201ENSMUST00000104833 80 ntBASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Alms1Q8K4E0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Gm15358-201ENSMUST00000119249 520 ntBASIC15.16■□□□□ 0.02
Alms1Q8K4E0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alms1Q8K4E0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms