Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cnot6Q8K3P5 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cnot6Q8K3P5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cnot6Q8K3P5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
Cnot6Q8K3P5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cnot6Q8K3P5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cnot6Q8K3P5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cnot6Q8K3P5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cnot6Q8K3P5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.33■□□□□ 0.04
Cnot6Q8K3P5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Mir770-201ENSMUST00000103252 94 ntBASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cnot6Q8K3P5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 AA414768-201ENSMUST00000121924 1257 ntBASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Gm6345-202ENSMUST00000180900 204 ntBASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cnot6Q8K3P5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms