Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Syne4Q8CII8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Gm25287-201ENSMUST00000103846 110 ntBASIC17.6■□□□□ 0.41
Syne4Q8CII8 Gm22918-201ENSMUST00000103855 110 ntBASIC17.6■□□□□ 0.41
Syne4Q8CII8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Syne4Q8CII8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.59■□□□□ 0.41
Syne4Q8CII8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Gm23547-201ENSMUST00000158210 271 ntBASIC17.59■□□□□ 0.41
Syne4Q8CII8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.59■□□□□ 0.41
Syne4Q8CII8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.59■□□□□ 0.41
Syne4Q8CII8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Syne4Q8CII8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syne4Q8CII8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Syne4Q8CII8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Syne4Q8CII8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Syne4Q8CII8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.58■□□□□ 0.4
Syne4Q8CII8 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.58■□□□□ 0.4
Syne4Q8CII8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.58■□□□□ 0.4
Syne4Q8CII8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.58■□□□□ 0.4
Syne4Q8CII8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
Syne4Q8CII8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.57■□□□□ 0.4
Syne4Q8CII8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne4Q8CII8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Gm10499-201ENSMUST00000174094 934 ntBASIC17.57■□□□□ 0.4
Syne4Q8CII8 Gm27437-201ENSMUST00000183429 107 ntBASIC17.57■□□□□ 0.4
Syne4Q8CII8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Syne4Q8CII8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.56■□□□□ 0.4
Syne4Q8CII8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Syne4Q8CII8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms