Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Rprl3-201ENSMUST00000157400 290 ntBASIC15.74■□□□□ 0.11
Clip4Q8CI96 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.74■□□□□ 0.11
Clip4Q8CI96 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.74■□□□□ 0.11
Clip4Q8CI96 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clip4Q8CI96 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.73■□□□□ 0.11
Clip4Q8CI96 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Gm36967-201ENSMUST00000193814 266 ntBASIC15.73■□□□□ 0.11
Clip4Q8CI96 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.73■□□□□ 0.11
Clip4Q8CI96 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Clip4Q8CI96 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.72■□□□□ 0.11
Clip4Q8CI96 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Gm7153-201ENSMUST00000117092 455 ntBASIC15.72■□□□□ 0.11
Clip4Q8CI96 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Gm15372-201ENSMUST00000120729 834 ntBASIC15.72■□□□□ 0.11
Clip4Q8CI96 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clip4Q8CI96 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Clip4Q8CI96 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.71■□□□□ 0.11
Clip4Q8CI96 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.71■□□□□ 0.11
Clip4Q8CI96 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.71■□□□□ 0.11
Clip4Q8CI96 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms