Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 Gm17271-201ENSMUST00000165535 355 ntBASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Rab11fip3Q8CHD8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Rab11fip3Q8CHD8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Rab11fip3Q8CHD8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab11fip3Q8CHD8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab11fip3Q8CHD8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab11fip3Q8CHD8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab11fip3Q8CHD8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Gm4995-201ENSMUST00000117247 432 ntBASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab11fip3Q8CHD8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Gm43575-201ENSMUST00000196420 516 ntBASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rab11fip3Q8CHD8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip3Q8CHD8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Gm18246-201ENSMUST00000221023 728 ntBASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip3Q8CHD8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms