Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rdh1Q8CGV4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Gm4995-201ENSMUST00000117247 432 ntBASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rdh1Q8CGV4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rdh1Q8CGV4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms