Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.91□□□□□ -0.18
ShfQ8CG80 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ShfQ8CG80 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ShfQ8CG80 Gm14722-201ENSMUST00000118943 689 ntBASIC13.91□□□□□ -0.18
ShfQ8CG80 Gm15794-201ENSMUST00000120182 631 ntBASIC13.91□□□□□ -0.18
ShfQ8CG80 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ShfQ8CG80 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.91□□□□□ -0.18
ShfQ8CG80 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.91□□□□□ -0.18
ShfQ8CG80 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ShfQ8CG80 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
ShfQ8CG80 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ShfQ8CG80 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ShfQ8CG80 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
ShfQ8CG80 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ShfQ8CG80 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ShfQ8CG80 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ShfQ8CG80 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ShfQ8CG80 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
ShfQ8CG80 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.9□□□□□ -0.18
ShfQ8CG80 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.9□□□□□ -0.18
ShfQ8CG80 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ShfQ8CG80 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.9□□□□□ -0.18
ShfQ8CG80 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ShfQ8CG80 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ShfQ8CG80 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.9□□□□□ -0.18
ShfQ8CG80 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
ShfQ8CG80 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ShfQ8CG80 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
ShfQ8CG80 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.9□□□□□ -0.19
ShfQ8CG80 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ShfQ8CG80 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
ShfQ8CG80 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
ShfQ8CG80 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ShfQ8CG80 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ShfQ8CG80 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.89□□□□□ -0.19
ShfQ8CG80 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ShfQ8CG80 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.89□□□□□ -0.19
ShfQ8CG80 Gm10231-201ENSMUST00000181584 441 ntBASIC13.89□□□□□ -0.19
ShfQ8CG80 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.89□□□□□ -0.19
ShfQ8CG80 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Gm17808-201ENSMUST00000200859 894 ntBASIC13.89□□□□□ -0.19
ShfQ8CG80 Gm10175-202ENSMUST00000208752 441 ntBASIC13.89□□□□□ -0.19
ShfQ8CG80 Gm9172-201ENSMUST00000212092 954 ntBASIC13.89□□□□□ -0.19
ShfQ8CG80 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
ShfQ8CG80 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms