Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Fam228aQ8CDW1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Mir6404-201ENSMUST00000183699 94 ntBASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Gm45058-201ENSMUST00000205810 766 ntBASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fam228aQ8CDW1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Gm27389-201ENSMUST00000183622 195 ntBASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fam228aQ8CDW1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Fam228aQ8CDW1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Fam228aQ8CDW1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Fam228aQ8CDW1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Gm18959-201ENSMUST00000208954 655 ntBASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fam228aQ8CDW1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fam228aQ8CDW1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Fam228aQ8CDW1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.36■□□□□ 0.21
Fam228aQ8CDW1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fam228aQ8CDW1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Fam228aQ8CDW1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms