Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps53Q8CCB4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps53Q8CCB4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Gm2213-201ENSMUST00000197485 688 ntBASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps53Q8CCB4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Gm5364-201ENSMUST00000216789 889 ntBASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vps53Q8CCB4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms