Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd4Q8CC84 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.02□□□□□ -0.17
Lysmd4Q8CC84 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd4Q8CC84 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lysmd4Q8CC84 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lysmd4Q8CC84 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Lysmd4Q8CC84 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14□□□□□ -0.17
Lysmd4Q8CC84 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14□□□□□ -0.17
Lysmd4Q8CC84 Gm13436-201ENSMUST00000120418 567 ntBASIC14□□□□□ -0.17
Lysmd4Q8CC84 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Gm37722-201ENSMUST00000193757 208 ntBASIC14□□□□□ -0.17
Lysmd4Q8CC84 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lysmd4Q8CC84 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Efs-202ENSMUST00000227037 2540 ntBASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.99□□□□□ -0.17
Lysmd4Q8CC84 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.98□□□□□ -0.17
Lysmd4Q8CC84 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms