Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a6Q8C6K9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a6Q8C6K9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Gm13823-201ENSMUST00000119930 345 ntBASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Gm27430-201ENSMUST00000184585 107 ntBASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Gm44333-201ENSMUST00000197168 107 ntBASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a6Q8C6K9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a6Q8C6K9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Gm17837-201ENSMUST00000186435 985 ntBASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms