Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Usp44Q8C2S0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Gm10060-201ENSMUST00000212002 111 ntBASIC18.23■□□□□ 0.51
Usp44Q8C2S0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.23■□□□□ 0.51
Usp44Q8C2S0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Usp44Q8C2S0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Gm6550-201ENSMUST00000187574 993 ntBASIC18.21■□□□□ 0.51
Usp44Q8C2S0 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Usp44Q8C2S0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.21■□□□□ 0.5
Usp44Q8C2S0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Usp44Q8C2S0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Gm7222-201ENSMUST00000117512 906 ntBASIC18.2■□□□□ 0.5
Usp44Q8C2S0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp44Q8C2S0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms