Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf3Q8C120 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sh3rf3Q8C120 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf3Q8C120 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.27■□□□□ 0.19
Sh3rf3Q8C120 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf3Q8C120 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf3Q8C120 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sh3rf3Q8C120 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf3Q8C120 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Gm9103-201ENSMUST00000119371 405 ntBASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sh3rf3Q8C120 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Asic1-205ENSMUST00000228185 1818 ntBASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Gm12644-201ENSMUST00000119935 606 ntBASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf3Q8C120 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Gm4459-201ENSMUST00000118750 468 ntBASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Gm9172-201ENSMUST00000212092 954 ntBASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Sh3rf3Q8C120 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.23■□□□□ 0.19
Sh3rf3Q8C120 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms