Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim47Q8C0E3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Gm4899-201ENSMUST00000178708 719 ntBASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim47Q8C0E3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.24■□□□□ 0.35
Trim47Q8C0E3 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim47Q8C0E3 Prob1-201ENSMUST00000097619 3021 ntBASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim47Q8C0E3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms