Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc44a2Q8BY89 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc44a2Q8BY89 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc44a2Q8BY89 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc44a2Q8BY89 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc44a2Q8BY89 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc44a2Q8BY89 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc44a2Q8BY89 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Gm26039-201ENSMUST00000158152 144 ntBASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Gm10231-201ENSMUST00000181584 441 ntBASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Gm27389-201ENSMUST00000183622 195 ntBASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Gm10175-202ENSMUST00000208752 441 ntBASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc44a2Q8BY89 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc44a2Q8BY89 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc44a2Q8BY89 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc44a2Q8BY89 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.21■□□□□ 0.02
Slc44a2Q8BY89 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc44a2Q8BY89 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc44a2Q8BY89 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc44a2Q8BY89 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc44a2Q8BY89 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc44a2Q8BY89 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Gm21559-201ENSMUST00000220638 855 ntBASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Gm8587-201ENSMUST00000076538 843 ntBASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc44a2Q8BY89 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc44a2Q8BY89 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms