Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Mir5130-201ENSMUST00000175160 84 ntBASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm45058-201ENSMUST00000205810 766 ntBASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Ppp1r3eQ8BRJ4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ank2-226ENSMUST00000189368 339 ntBASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.6□□□□□ -0.07
Ppp1r3eQ8BRJ4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppp1r3eQ8BRJ4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppp1r3eQ8BRJ4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ppp1r3eQ8BRJ4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms