Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Mir770-201ENSMUST00000103252 94 ntBASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 AA414768-201ENSMUST00000121924 1257 ntBASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Gm23634-201ENSMUST00000175071 91 ntBASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ckap4Q8BMK4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Gm10052-201ENSMUST00000168019 960 ntBASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Gm7729-201ENSMUST00000050143 801 ntBASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ckap4Q8BMK4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Gm6659-201ENSMUST00000174752 547 ntBASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ckap4Q8BMK4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms