Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col16a1Q8BLX7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col16a1Q8BLX7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col16a1Q8BLX7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col16a1Q8BLX7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col16a1Q8BLX7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col16a1Q8BLX7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Gm15487-201ENSMUST00000122373 465 ntBASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col16a1Q8BLX7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Gm7730-201ENSMUST00000212486 454 ntBASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 AC132863.2-201ENSMUST00000226643 799 ntBASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Gm8116-201ENSMUST00000182917 1201 ntBASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Gm9063-201ENSMUST00000223299 582 ntBASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Col16a1Q8BLX7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Gm7653-201ENSMUST00000214567 508 ntBASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Gm13517-201ENSMUST00000120782 1495 ntBASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col16a1Q8BLX7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Gm7775-201ENSMUST00000218871 853 ntBASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.23■□□□□ 0.83
Col16a1Q8BLX7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Gm15483-201ENSMUST00000120338 456 ntBASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 AC130829.1-201ENSMUST00000221548 494 ntBASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms