Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Depdc1bQ8BH88 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Depdc1bQ8BH88 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Depdc1bQ8BH88 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Depdc1bQ8BH88 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Depdc1bQ8BH88 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Depdc1bQ8BH88 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
Depdc1bQ8BH88 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Depdc1bQ8BH88 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Depdc1bQ8BH88 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Sybu-209ENSMUST00000228639 4113 ntBASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Depdc1bQ8BH88 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Gm15165-201ENSMUST00000118140 502 ntBASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Gm11452-201ENSMUST00000122376 690 ntBASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Gm6257-201ENSMUST00000163864 910 ntBASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Gm43514-201ENSMUST00000198852 424 ntBASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Rps4l-201ENSMUST00000071745 943 ntBASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Depdc1bQ8BH88 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms