Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Usp6nlQ80XC3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp6nlQ80XC3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 AA543401-201ENSMUST00000164248 1269 ntBASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Mir6990-201ENSMUST00000183724 91 ntBASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp6nlQ80XC3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Rpph1-201ENSMUST00000175096 319 ntBASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp6nlQ80XC3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Usp6nlQ80XC3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Usp6nlQ80XC3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp6nlQ80XC3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms