Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.88□□□□□ -0.03
Vrk1Q80X41 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Vrk1Q80X41 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Gm6257-201ENSMUST00000163864 910 ntBASIC14.87□□□□□ -0.03
Vrk1Q80X41 Gm17271-201ENSMUST00000165535 355 ntBASIC14.87□□□□□ -0.03
Vrk1Q80X41 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Gm19164-201ENSMUST00000210667 640 ntBASIC14.87□□□□□ -0.03
Vrk1Q80X41 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.87□□□□□ -0.03
Vrk1Q80X41 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Vrk1Q80X41 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Vrk1Q80X41 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.85□□□□□ -0.03
Vrk1Q80X41 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vrk1Q80X41 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vrk1Q80X41 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms