Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.32□□□□□ -0.28
Ubr5Q80TP3 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ubr5Q80TP3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ubr5Q80TP3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Mir1247-201ENSMUST00000116706 82 ntBASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Gm3436-201ENSMUST00000179930 840 ntBASIC13.3□□□□□ -0.28
Ubr5Q80TP3 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ubr5Q80TP3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ubr5Q80TP3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms